BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A04LP1|AL426619
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1538 0.0
>3x_Contig1683
Length = 16378
Score = 1538 bits (776), Expect = 0.0
Identities = 803/808 (99%), Gaps = 3/808 (0%)
Strand = Plus / Plus
Query: 1 gaaattcatcgtaaataaataatttcacagcaaaataattgtcctccaaaatgacgtcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4750 gaaattcatcgtaaataaataatttcacagcaaaataattgtcctccaaaatgacgtcct 4809
Query: 61 atcttacaaacattatataaggatcatgttctactatcatgggaggtataactagggcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4810 atcttacaaacattatataaggatcatgttctactatcatgggaggtataactagggcgc 4869
Query: 121 tccctctatattaccactattattctcatcactaccaagaaaggcatatgactcgaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4870 tccctctatattaccactattattctcatcactaccaagaaaggcatatgactcgaaagt 4929
Query: 181 tttaattgttatgaagaatagaaagataaaggaaggatcttcaaaaaaaatttggaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4930 tttaattgttatgaagaatagaaagataaaggaaggatcttcaaaaaaaatttggaattt 4989
Query: 241 acatatatggtttgatatgtaacaaggaagaggaacaagaagacaagacttagaatattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4990 acatatatggtttgatatgtaacaaggaagaggaacaagaagacaagacttagaatattc 5049
Query: 301 gaggataaaggg-ctgtaacattaagaacagccttttttaagtgacaatacaggaaaact 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5050 gaggataaaggggctgtaacattaagaacagccttttttaagtgacaatacaggaaaact 5109
Query: 360 gataacatgagtgatccgacctggtgcgataaatcgctatggcctcaaattagtgttgct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5110 gataacatgagtgatccgacctggtgcgataaatcgctatggcctcaaattagtgttgct 5169
Query: 420 tcaggagggatttcgtttttaacttcgttcgtcgctcaaatcccacaactgatagaaact 479
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 5170 tcaggagggatttcgtttttcacttcgttcgtcgctcaaatcccacaactgatagacact 5229
Query: 480 tatcgtgacaagagtgttgaagggttatcaccaggatttctattatgctggcttttcggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5230 tatcgtgacaagagtgttgaagggttatcaccaggatttctattatgctggcttttcggg 5289
Query: 540 gatataaccagtttaattggagctgtacttactcatcaactcccattccagattcttttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5290 gatataaccagtttaattggagctgtacttactcatcaactcccattccagattcttttg 5349
Query: 600 gcagtttattatttgtctaatgacatgttgatatgtggtcaatactattactacggtatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5350 gcagtttattatttgtctaatgacatgttgatatgtggtcaatactattactacggtatt 5409
Query: 660 ttacaccggaatcagctagcgactccaggccatgagtctgctactttagaagaacgaaca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5410 ttacaccggaatcagctagcgactccaggccatgagtctgctactttagaagaacgaaca 5469
Query: 720 cgtttggtacgaagccgtggttcaaaccccagtattcaattgcaacgcgggttcaaatgg 779
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 5470 cgtttggtacgaagccgtggttcaaaccccagtattcaattgc-acgcgggttc-aatgg 5527
Query: 780 tggatcttatcattcttcgtcagtcagc 807
||||||||||||||||||||||||||||
Sbjct: 5528 tggatcttatcattcttcgtcagtcagc 5555
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6143
Number of Sequences: 1807
Number of extensions: 6143
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)